PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08631.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 97aa    MW: 10852.2 Da    PI: 7.8293
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.31.7e-101138126
                --S---SGGGGTS..--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartG..tCkyGdrCkFaHg 26
                +k ++C  ++++G  tC++G  C+F+H+
  MCI08631.1 11 WKVAICGEYMKSGykTCSHGTACNFIHC 38
                89*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
VSCKFVNLTR WKVAICGEYM KSGYKTCSHG TACNFIHCFR NPGGDYGWAD SDKPPPKFWV  60
NEMVALFGHS DDDHGNFSAL KHSSNVPKTD SDRCAFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.13e-40C3H family protein