PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08718.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 146aa    MW: 16098 Da    PI: 9.9332
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.0006199121123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+dC ++ +++  + +H  +H
  MCI08718.1  99 YTCSDCFQVVPTSQKFANHVTSH 121
                 9******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MYDHSLSYSN SSSSAGTKKF GSHAHAIRKA MQMLKAQFGH PHISLLSSSS SIINNIDVDV  60
VATDGVAIGD GNKNKRKKKT KTINDGRIHN LPHSKYGPYT CSDCFQVVPT SQKFANHVTS  120
HYRARKLSDL QGDKSYVAHV NDEDHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18490.11e-11C2H2 family protein