PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08757.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 120aa    MW: 13708.7 Da    PI: 8.3418
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.9e-173986148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT  Ed++lv++vk+ G g+W+++ ++ g+ R++k+c++rw ++l
       MCI08757.1 39 KGPWTSAEDDILVNYVKKNGEGNWNAVHKHTGLLRCGKSCRLRWANHL 86
                     79******************************99**********9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MMRRMKKEIE DEMFHDGETG LQLDDEGYDG SACGVVLKKG PWTSAEDDIL VNYVKKNGEG  60
NWNAVHKHTG LLRCGKSCRL RWANHLRPNL KKGTFTAQEE QLICELHAKM GNKWARMASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06100.11e-50MYB family protein