PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08877.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 183aa    MW: 20372.8 Da    PI: 8.0975
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.81.1e-2137130186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr...tsessstcpyfdqle 86 
                 +Wt +e+ aLi+ +r+++ +l+r++lk+ +W+ev++++      + + +++++qC++k+e+l+kry+ + ++ ++    +s+sss++++f++++
  MCI08877.1  37 CWTPEETSALIDSYRDKWYSLGRTNLKAIHWQEVADAVtakcpNASPTHKTAVQCRHKMEKLRKRYRSEIQRLRSLpvpRSRSSSSWVHFKSMD 130
                 8*************************************************************************98655589999********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MASSPTDSNP PSAVPLPLSL PAPPPPTTSS RRLPPPCWTP EETSALIDSY RDKWYSLGRT  60
NLKAIHWQEV ADAVTAKCPN ASPTHKTAVQ CRHKMEKLRK RYRSEIQRLR SLPVPRSRSS  120
SSWVHFKSMD SMEKGPSPPS PPPMKIENPN HLNHRETLDD NDDLDDDDLY EELRSAAGGG  180
SGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.13e-35Trihelix family protein