PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI08890.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 89aa    MW: 10000.6 Da    PI: 8.8016
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI08890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.12.4e-066386629
                HHHHHHHHHHHHHHHHHHHCTSCC CS
         HLH  6 nerErrRRdriNsafeeLrellPk 29
                +++Er RR +i +++ +L++l+P+
  MCI08890.1 63 SIAERVRRTKISERMRKLQDLVPN 86
                689********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MCFCCIDDQN ETGGQPPTAP LAHQMSLPNT TAELAAIEKF LQFSDSVPCK IRAKRGCATH  60
PRSIAERVRR TKISERMRKL QDLVPNMDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.13e-32bHLH family protein