PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI09240.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ZF-HD
Protein Properties Length: 189aa    MW: 20998.8 Da    PI: 9.7031
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI09240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer85.46.3e-27761358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 k  +keC+kNhA s+Gg+a+DGC+Ef+p+ g egt++ +kCaAC CH+nFHR+e++
   MCI09240.1  7 KEIFKECRKNHASSIGGYALDGCCEFLPA-GVEGTIDFFKCAACYCHKNFHRKETV 61
                 6789************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSNFQSKEIF KECRKNHASS IGGYALDGCC EFLPAGVEGT IDFFKCAACY CHKNFHRKET  60
VAREPTHFLS KITYSPQPTP ISTVFQTPNG YRHVTGPSRG TTTAPAFPSV VIHDGAHFHL  120
TDQINGGGTS GGGEGSSSSK KRFRTKFSHE QKEKMLDFAV KIGWRIKKQD QNAVEIFCNK  180
IGVKFQVFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-35ZF-HD family protein