PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI09259.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family AP2
Protein Properties Length: 82aa    MW: 9289.61 Da    PI: 10.7088
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI09259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.91.2e-083769338
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38
                y+GV++++++ +W A+I  +     +k  +lg+fg 
  MCI09259.1 37 YRGVTRHHQQSKWQARIGRVAG---NKDLYLGTFGK 69
                9***************988532...5********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
VSHYAKELEE MKDVGNQEFV ASLRRKSSGF ARGASMYRGV TRHHQQSKWQ ARIGRVAGNK  60
DLYLGTFGKL SPSVINLLFY TI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.16e-35AP2 family protein