PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI09552.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 183aa    MW: 20409.9 Da    PI: 10.3167
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI09552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.13.2e-38241752116
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 
                 ++kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ ++++        +            
  MCI09552.1  24 TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFL-----Ppspfilgkrlrs 117
                 79**************************************************************99999666211111111.....1223334444444 PP

         TCP  89 ....................................kaaksaakskksqksaasalnlakesra 116
                                                             s +++++++++++l +++++
  MCI09552.1 118 ehdeavsiaaptappgiwrpdfaqlwsfaaaqpppeV------LSISPHQQQHQHNSLFHHQQQ 175
                 4455566667777788888888888888765332220......222222222222333332222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSNCKETTTN TTTTNAVEPT TNQTVKKPPS KDRHSKVDGR GRRIRMPIIC AARVFQLTRE  60
LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSSLSEH KPFLPPSPFI LGKRLRSEHD  120
EAVSIAAPTA PPGIWRPDFA QLWSFAAAQP PPEVLSISPH QQQHQHNSLF HHQQQQQQHN  180
QHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.18e-46TCP family protein