PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI09630.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

TCP

Protein Properties

Length: 220aa MW: 24256 Da PI: 10.0227

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI09630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.4	8.4e-41	100	196	2	96
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.k 96 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s +++ +s+ + MCI09630.1 100 PPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPSQLRSSYfN 196 789******************************************************************9998888888888876666555444434 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MEGGDDLHHH HHHHHHQHLH HQQHQQQXXX XXXXXXXXXX XXKKEDNQEA ASCSTSSPYP 60 SLAISPISPT EPSTSNSNRS NQLVSASAPT TSDPGNKKPP PKRTSTKDRH TKVEGRGRRI 120 RMPALCAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS 180 GSSMSVPSQL RSSYFNPNFS LQQRRTLFPG IGLSSSDNSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-50	TCP family protein