PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI09951.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YB
Protein Properties Length: 109aa    MW: 12439.8 Da    PI: 4.868
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI09951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB47.25.4e-1562108652
       NF-YB   6 rflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasd 52 
                 ++lPi+ +++im ++lP++a+is+dake++q cvsef   + sea++
  MCI09951.1  62 NLLPITKLTKIMERALPQDAQISDDAKESMQLCVSEFARIIMSEANK 108
                 689******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MEHGSPSINH NHLAQLRSFN LQLANQSEIN ESLRNKDNDD DDNNNIGVEI QQRHLPPTTD  60
YNLLPITKLT KIMERALPQD AQISDDAKES MQLCVSEFAR IIMSEANKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47640.11e-12NF-YB family protein