PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI10031.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 158aa    MW: 17620 Da    PI: 10.3106
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI10031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.7e-074371447
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      + +++G+g+W+ I++ +  +Rt+ q+ s+ qky
       MCI10031.1  4 VGLEKMGKGDWRGISKNFVPTRTPTQVASHAQKY 37
                     5789***************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MFMVGLEKMG KGDWRGISKN FVPTRTPTQV ASHAQKYFLR LSTINNKKRR SSLFDLVGSK  60
NTNTKGQDNA NSIVLSHKLE DKCKCEVEIN DGTTFFKQEV VKSDKQETNY SQVNWLHNHS  120
SNYATVPNLD LTLAVSSPKK TNKSTPAGPL LFGPISVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-27MYB_related family protein