PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI10340.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 114aa    MW: 13410.4 Da    PI: 10.2619
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI10340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.62.7e-4119336129
         NAM  36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                 +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++lvg+kktLvfykgrapkgek++Wvmheyrle
  MCI10340.1   1 DVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEQGYWKATGKDKEIFK-GKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 93 
                 589**********888999****************************************.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
DVDLNKSEPW DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATEQGYWKA TGKDKEIFKG  60
KSLVGMKKTL VFYKGRAPKG EKSNWVMHEY RLEGKFSVHN LPKAAKGVSE EFSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.13e-70NAC family protein