PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI10886.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 119aa    MW: 13584.1 Da    PI: 7.0429
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI10886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000911943223
                EET..TTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  2 kCp..dCgksFsrksnLkrHirt.H 23
                +C   +C k+F  + ++++Hi   H
  MCI10886.1 19 VCAapHCLKTFFKRAEFESHIHEyH 43
                67788****************8877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
CDERIQKIQT VKVMEGILVC AAPHCLKTFF KRAEFESHIH EYHADLIPSN PDKEDGNESE  60
AQSVRQPTAS DSTARGPQRQ VFSPGSNSQP HDLEERTRRQ PVRDQTPSRP TMQQKPPFF