PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11153.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 172aa    MW: 19532 Da    PI: 9.4955
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-20131165135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ +Tp+WR gp+g+ktLCnaCG++y++ +l
  MCI11153.1 131 CHHCGADNTPQWRAGPNGPKTLCNACGVRYKSGRL 165
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MNDVKINVPV IFMFQEYAEE ELEWLSNKDA FPAVETFVDI SCIQPDMSKY QKTTPTLENS  60
TSSSNNSNNS SNSITLLSGY NQMKFPVRAR SKSRSKPRLV DTLNQQFPWK QPSTKISREQ  120
VRPTSNIERK CHHCGADNTP QWRAGPNGPK TLCNACGVRY KSGRLVPEYR PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-25GATA family protein