PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11167.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Nin-like
Protein Properties Length: 104aa    MW: 11402.2 Da    PI: 11.2496
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK95.73.2e-303484252
      RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++
  MCI11167.1 34 EKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 84
                79***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
GIHGEDIGGS INPMSSLGNK NIKKPSERKR GKTEKSISLE VLQRYFAGSL KDAAKSLGVC  60
PTTMKRICRQ HGISRWPSRK INKVNRSLSK LKRVIESVQG AEGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.18e-46Nin-like family protein