PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11209.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 127aa    MW: 14016.3 Da    PI: 5.4372
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26061.32.7e-191594199
      DUF260 41 nvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                nv+kll++++ ++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+++++
  MCI11209.1  1 NVSKLLNEVQAHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNA 59
                799***************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
NVSKLLNEVQ AHQREDAVNS LAYEAEARIK DPVYGCVGAI SVLQRQVIRL QKELDATNAD  60
LIRYSTCTDH ILPNNQHQDH QATRIHEDGG GSSLVHQSPP ANFYYPSPWN NDPLGDGNFH  120
TGGGDNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.13e-36LBD family protein