PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11265.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 148aa    MW: 16469.5 Da    PI: 4.6791
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-11959447
                     S-HHHHHHHHHHHHHTTTT........-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg........tWktIartmgkgRtlkqcksrwqky 47
                     W+ eE++ + +a++++ ++        +W++Ia++++ ++t +++k ++q +
       MCI11265.1  9 WSYEEEKSFENAIAMHWNEkeeedsneQWEKIASCVP-NKTMEEVKQHYQLL 59
                     *************************************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSSSSGTIWS YEEEKSFENA IAMHWNEKEE EDSNEQWEKI ASCVPNKTME EVKQHYQLLV  60
DDVSAIEAGH VSFPNYANEL ETTTNSSNKD SSKSSTSSDK RSSSCNFGSG FSGLGHDSNH  120
HSSGKGGLSR SSSEQERRKG IPWTEEEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-21MYB family protein