PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11453.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 219aa    MW: 24837.3 Da    PI: 5.7411
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.41.8e-1873160187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 +W++  + +L+ea++++ ++l+rg+l++ +Weev++      +  ++s +qCk+k +nl+kryk ++++++++ + s s++p+++q+e+
  MCI11453.1  73 EWSDTAIVCLLEAYTDKFTQLNRGNLRGRDWEEVASXXxxXCENQSKSVEQCKNKVDNLKKRYKLERHRMNNG-CISASHWPWYKQMEH 160
                 5***********************************9988889999**************************8.99999********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
STASVHSKPV ADDDTDDYGN PFDDDAGSEK RKDRDEIGDA TTSYAFNKRP KPVSSGSGGV  60
GGVGAEYRKD REEWSDTAIV CLLEAYTDKF TQLNRGNLRG RDWEEVASXX XXXCENQSKS  120
VEQCKNKVDN LKKRYKLERH RMNNGCISAS HWPWYKQMEH IVGNSLPSKF ADDDKAIVPA  180
SISPRQSKRF LLFLFFCFXX XXXXXXXXXX LGDYGLELE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.26e-60Trihelix family protein