PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI11649.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

MYB

Protein Properties

Length: 141aa MW: 16147.7 Da PI: 8.9706

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI11649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed++lv++vk+ G g+W+++ ++ g+ R++k+c++rw ++l MCI11649.1 39 KGPWTSAEDDILVNYVKKNGEGNWNAVHKHTGLLRCGKSCRLRWANHL 86 79****************************99********9996 PP
2	Myb_DNA-binding	22.3	3.1e-07	92	122	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g +T++E++l+ ++++++G++ W++ a+ + MCI11649.1 92 KGTFTAQEEQLICELHAKMGNK-WARMASFVF 122 799*****************.*998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MMRRMKKEIE DEMFHDGETG LQLDDEGYDG SACGVVLKKG PWTSAEDDIL VNYVKKNGEG 60 NWNAVHKHTG LLRCGKSCRL RWANHLRPNL KKGTFTAQEE QLICELHAKM GNKWARMASF 120 VFMKSLNSIH FPLLMSLLRL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	1e-50	MYB family protein