PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11957.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WOX
Protein Properties Length: 155aa    MW: 17930 Da    PI: 6.6733
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.67.7e-222181257
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                r+R+t+t+ ql++Le+ F + n +ps++++++++++l    +++e++V++WFqNrRa+ k+
  MCI11957.1 21 RQRWTPTPIQLQILERIFDEgNGTPSKQKIKDITNELgqhgQISETNVYNWFQNRRARSKR 81
                89*****************99**************************************97 PP
2Wus_type_Homeobox101.37e-332083265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtPtp Q++iLe+++++G  tP+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq
         MCI11957.1 20 SRQRWTPTPIQLQILERIFDEGNGTPSKQKIKDITNELGQHGQISETNVYNWFQNRRARSKRKQ 83
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
RLGNLYCDPL MACSGHKITS RQRWTPTPIQ LQILERIFDE GNGTPSKQKI KDITNELGQH  60
GQISETNVYN WFQNRRARSK RKQSVPTTNQ SEPEPETEVE SPKENKTHEE CDRVQFFENL  120
SPHSVKDMYI QSPDIGFEHL LSKIEVSGSY SSYFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17583RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.17e-48WOX family protein