PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI11988.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YB
Protein Properties Length: 90aa    MW: 9656.74 Da    PI: 7.4188
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI11988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB119.41.6e-372890264
       NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrkting 64
                reqdr+lPian+srimkk+lP+n+ki+kdak+t+qecvsefisf+tseas+kcq+ekrkting
  MCI11988.1 28 REQDRYLPIANISRIMKKALPSNGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTING 90
                89***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MADAESPAGG SHESGGEQSP HGSSSAAREQ DRYLPIANIS RIMKKALPSN GKIAKDAKDT  60
MQECVSEFIS FITSEASEKC QKEKRKTING
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.12e-44NF-YB family protein