PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12069.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 96aa    MW: 10480.2 Da    PI: 7.2592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.0002123752247
                HHHCTSCC.C.............................TTS-STCHHHHHHH CS
         HLH 22 eLrellPk.as..........................kapskKlsKaeiLekA 47
                eL+ +l + a+                          ++p++Kl KaeiLe A
  MCI12069.1 23 ELKAVLGEvACdihgcfvlksskddlfrdvvidmlrgSGPNGKLRKAEILEAA 75
                555555555556666666677777777777788888899************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MLPKGGSKID VDAANSLDVP QDELKAVLGE VACDIHGCFV LKSSKDDLFR DVVIDMLRGS  60
GPNGKLRKAE ILEAARRKLG RDVPNNEYIK VSFLLV