PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12112.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 78aa    MW: 9222.51 Da    PI: 10.4407
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.51.3e-231873357
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--S CS
        WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHn 57
                Dgy+WrK G K vkg+++pr+YYrCts+ +C ++k++++  ++ +v+++ Y++ H 
  MCI12112.1 18 DGYRWRKVGEKIVKGNPHPRHYYRCTSSaRCLARKHIQTVVDNSDVIVTYYKEAHS 73
                9*************************999*************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
VERVERVEKA RYVRISGDGY RWRKVGEKIV KGNPHPRHYY RCTSSARCLA RKHIQTVVDN  60
SDVIVTYYKE AHSRCTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-22WRKY family protein