PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12168.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 115aa    MW: 13216.3 Da    PI: 10.4614
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.62.2e-3148053128
         NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ +glkk+Lvfykgra kg ktdW+mhe+rl
  MCI12168.1   4 TGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 80 
                 5789**************************************956677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
FASTGEKEWY FYCPRDRKYR NSARPNRVTG AGFWKATGTD RPIYSSEGSK CIGLKKSLVF  60
YKGRAAKGIK TDWMMHEFRL PSLTDPLSPK KYLEKTIPAN LLHDAVMHLN RSITI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.11e-53NAC family protein