PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12458.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 106aa    MW: 11860.5 Da    PI: 6.7458
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind82.94.6e-261982265
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE- CS
  HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkv 65
                  Fl+k+++++ed+++++++sws   nsfvv+d ++f++++Lp+yFkhsnf+SFvRQLn+Y +   
    MCI12458.1 19 FLTKTFDVVEDPSTDSIVSWSGARNSFVVWDLHKFSTTILPRYFKHSNFSSFVRQLNTYVYCVY 82
                  9********************999***********************************88655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
SNLTPKPMEG LHEIGPPPFL TKTFDVVEDP STDSIVSWSG ARNSFVVWDL HKFSTTILPR  60
YFKHSNFSSF VRQLNTYVYC VYTDTSVDVS GVCVCVCVVS GVCVRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-44HSF family protein