PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12470.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 79aa    MW: 9345.6 Da    PI: 6.8049
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.6e-07446344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +++ +a + +  +   +W  +a+++g  ++ +++k ++
       MCI12470.1  4 AWTPRQNKQFERALAIYDREtpdRWQNVANMVG--KSVEDVKRHY 46
                     8*****************88************8..9********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MGSAWTPRQN KQFERALAIY DRETPDRWQN VANMVGKSVE DVKRHYEILK EDVRRIEHAS  60
ETFLEALMFP VSEAFHPLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-22MYB_related family protein