PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI12707.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 123aa    MW: 13841.7 Da    PI: 5.2334
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI12707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.3e-16401121492
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 + + lp +f+ eh    ++++ +tlede+g +++  +   +++++  l++GW+ F+ +++L++gD +vF+l++  +f+ 
  MCI12707.1  40 KSMGLPSRFCVEHLP--KTGFNMTLEDEDGSEYDAVY--IGSRSG--LSGGWRAFALEHKLDDGDALVFELVEPARFKV 112
                 4589*********53..36789***************..555555..9**********************998666644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
YVARPLDEIK QATEKERRRA YEAAEALQIN LQSSKPSFIK SMGLPSRFCV EHLPKTGFNM  60
TLEDEDGSEY DAVYIGSRSG LSGGWRAFAL EHKLDDGDAL VFELVEPARF KVIYVVSSHP  120
TLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.11e-32B3 family protein