PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI13003.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C2H2

Protein Properties

Length: 50aa MW: 6042.8 Da PI: 8.7308

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI13003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.5	3e-07	23	47	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H MCI13003.1 23 HICPypDCGKRYAHEYKLKNHIASH 47 689********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 50 aa Download sequence
MQAFSLDFNL RSHMKTHSQE NYHICPYPDC GKRYAHEYKL KNHIASHHEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.3	3e-27	C2H2 family protein