PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI13549.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 123aa MW: 13770.4 Da PI: 10.5844

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI13549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	7.8e-05	21	58	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le+ ++++ Lq MCI13549.1 21 RQLIQDRIKELRELVPNgA------KCSIDSLLERSIKHMLFLQ 58 67799************77......5555567777777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
SKNSKKRARP GESCRPRPRD RQLIQDRIKE LRELVPNGAK CSIDSLLERS IKHMLFLQGI 60 AKHADKLTKX AXTKSKLHHM ETDILGSSSS EQGSSWAVEV GGHLKVHSIL VENLSKNGQM 120 LVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.3	2e-38	bHLH family protein