PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14106.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 222aa    MW: 24645.9 Da    PI: 4.8021
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1656.1e-51792223146
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  lLl+cAe+v+ ++l+ a+ lL ++ el+sp g++ +R+ ayf++AL+ar+++s+ + y+ l++++ + ++s++ ++a++ ++ vsP++kfsh+taNqa
  MCI14106.1  79 GLLLQCAECVAMDNLBFANXLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQA 177
                 58******************************************************************99***************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTg 146
                 I +av+ge+r+HiiD+di+qGlQWp L++ LasR+++  s+RiTg
  MCI14106.1 178 IFQAVDGEDRIHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITG 222
                 ********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MLQSLVPRPP LTSKPNNNMN AKRAEREHDD DDSTLQEQPS FKRPNYSAEN TAVEAEEHDQ  60
EQAFEPENEG ESTGLKLLGL LLQCAECVAM DNLBFANXLL PEITELSSPF GTSPERVGAY  120
FAQALQARVV SSCLGSYSPL TAKSVTLTQS QRIFNAFQSY NSVSPLVKFS HFTANQAIFQ  180
AVDGEDRIHI IDLDIMQGLQ WPGLFHILAS RSKKIRSVRI TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-69GRAS family protein