PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14208.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 120aa    MW: 13295.9 Da    PI: 10.2466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.5e-1069117355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  MCI14208.1  69 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 117
                 58*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
DGDSDKATKT LEHPRETAKD NCESRKKGKQ LTTSTAKASG KNAKQGSQAS DLPNEGYVHV  60
RARRGQATNS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII NYVQSLQQQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.11e-48bHLH family protein