PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14485.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 99aa    MW: 11179.7 Da    PI: 10.0651
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.6e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++W++eE+  l+ +v ++G g W+tI +          R+  ++k++w+++
       MCI14485.1  5 KQKWSAEEEAALKAGVVKHGVGKWRTILKDPEfncvlYIRSNVDLKDKWRNL 56
                     79***********************************99***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MGAPKQKWSA EEEAALKAGV VKHGVGKWRT ILKDPEFNCV LYIRSNVDLK DKWRNLSVMA  60
NGWTSREKAK VSIRRAHHQG SRHDDNPMAV TPVTPSDDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-43MYB_related family protein