PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14503.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 191aa    MW: 21789.9 Da    PI: 4.5132
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix110.21.3e-3420105187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k ev+aLi++r++m+++++++  k+plWee+s++m+  g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  MCI14503.1  20 RWPKVEVQALINLRTSMDNKYQENVPKGPLWEEISSAMKNLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 105
                 8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MEIVKVDNNG ENFMGVSPSR WPKVEVQALI NLRTSMDNKY QENVPKGPLW EEISSAMKNL  60
GYNRNAKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF HQLDALYKEK GKGDNSGGSG  120
GSSQVVKADN MTAPLMVRPE QQWPPQQEED RMNRNRGEEE DDMDEDDKEG EDENEEDMDE  180
SGGGGGGSNF E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.16e-57Trihelix family protein