PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14667.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 93aa    MW: 10354.6 Da    PI: 6.5002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.1e-113492154
                EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EE CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrk 54
                f+k+lt sd++++g +++p++ ae++      ++++ s++l+ +d++g  W++++iyr+
  MCI14667.1 34 FCKTLTASDTSTHGGFSVPRRAAEDCfppldYKQERPSQELVAKDLHGVNWKFRHIYRG 92
                99****************************8444556789***************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
LAGMCLDDKE CEGLEADEDG NGKTTPAKLA SHMFCKTLTA SDTSTHGGFS VPRRAAEDCF  60
PPLDYKQERP SQELVAKDLH GVNWKFRHIY RGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.13e-40ARF family protein