PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14781.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 106aa    MW: 11863.2 Da    PI: 6.758
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH41.32.5e-135984227
                -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                ++++C+f+++tG Ck+G+ C+F+H++
  MCI14781.1 59 DQPECQFYMKTGDCKFGAVCRFHHPR 84
                789*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MGSDSPQQTM RNDQTYGTSH QGEPENTGLQ GAYSQYRSGS VPVGFYALQR ENIFPERPDQ  60
PECQFYMKTG DCKFGAVCRF HHPRERTVPA PDCILSPIGL PLRPVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16540.32e-36C3H family protein