PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI14814.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C2H2

Protein Properties

Length: 129aa MW: 15188.4 Da PI: 9.8103

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI14814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	13	38	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L +H r+ + MCI14814.1 13 YQCDieGCTMSFESKQELLHHKRNvC 38 99********************9877 PP
2	zf-C2H2	17.6	1e-05	37	60	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L++H r+H MCI14814.1 37 VCPvkGCGKKFFSHKYLVQHRRVH 60 69999*****************99 PP
3	zf-C2H2	11.5	0.00096	67	90	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 kCp C++sF+ + Hir+H MCI14814.1 67 KCPwkGCKMSFKWAWARTEHIRVH 90 79********************99 PP
4	zf-C2H2	14.8	8.1e-05	96	122	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y C Cg++F+ s++ rH r+ H MCI14814.1 96 YACAepGCGQTFRFVSDFSRHKRKtgH 122 778888*****************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence
ARDPKTEDEE AEYQCDIEGC TMSFESKQEL LHHKRNVCPV KGCGKKFFSH KYLVQHRRVH 60 EDDRPLKCPW KGCKMSFKWA WARTEHIRVH TGARPYACAE PGCGQTFRFV SDFSRHKRKT 120 GHLAKKIRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-70	C2H2 family protein