PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI14836.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 105aa    MW: 12289.2 Da    PI: 7.1444
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI14836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS110.81.8e-342105190292
        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 +le+L++++gEa+aVn++++lh+++de+v+  + +rd++++lvk lsPkvv++veqe+++n+ +Fl rf+e+++yy a+f+s++++lpre++eri+vE+
  MCI14836.1   2 KLEDLKLRRGEAIAVNFAMMLHHVPDENVHGGQnHRDRLVRLVKCLSPKVVTLVEQESNTNELPFLPRFVETMNYYLAVFESIDVSLPREHRERINVEQ 100
                 6899************************9877669**************************************************************** PP

        GRAS 288 ellgr 292
                 ++l+r
  MCI14836.1 101 HCLAR 105
                 **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MKLEDLKLRR GEAIAVNFAM MLHHVPDENV HGGQNHRDRL VRLVKCLSPK VVTLVEQESN  60
TNELPFLPRF VETMNYYLAV FESIDVSLPR EHRERINVEQ HCLAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.13e-49GRAS family protein