PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15105.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 236aa    MW: 27451 Da    PI: 7.6038
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.36e-141603390
        FAR1 33 fvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                fvC ++g+re++  + ++++r++++etr gC+ak++v+ +  +++w++t +  +HnH+l 
  MCI15105.1  1 FVCHRQGFREDRGLTiENRKRERKPETRSGCEAKFRVHIDIlSQRWQITVFTDQHNHDLL 60
                9***********999778889999***************999***************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
FVCHRQGFRE DRGLTIENRK RERKPETRSG CEAKFRVHID ILSQRWQITV FTDQHNHDLL  60
DEKYCGMLPA HRRMKESDTV QMNDMLKGGI GPSQFYASMA NQAGGYENIG FRRKDIYNQI  120
GKQRRLKHCD GKNALHYLRG LASDDPMMFY RHTVDGEGRL EHLFWCDGIS QMDYQVYGDV  180
LAFDATYGRN KYHCPLVVFS GVNNHNNNVI FAGAIVANEK EETYVWVLEQ FLEAMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-39FAR1 family protein