PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI15171.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Trihelix

Protein Properties

Length: 151aa MW: 16916.7 Da PI: 6.3885

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI15171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.8	2e-11	116	151	1	36
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ MCI15171.1 116 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSS 151 8*********************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MTTDLRQLVN GTRSTHFPSI PATAEDFFPG HRNLTALLTN SQQTHHQNEQ QQQYEMMMLG 60 RGVVLEDFNN ITTTTQHHHV XXXXXXXXTT TTTTASASVS TPETTGCIGG DASTGRWPRQ 120 ETLTLLEIRS RLDPKFKEAN QKGPLWDEVS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10000.2	6e-20	Trihelix family protein