PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15321.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 196aa    MW: 22436.5 Da    PI: 8.8411
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.73.2e-0760140790
        FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 A ++GF+++++ks++ +  ++     + Cs+ g  +e+++k   +++ +a+ +  C  +l+     +++ +++ +  eHnHel+
  MCI15321.1  60 AVKAGFTMVIEKSNSGSY-RRKNYFVLGCSRGGAYKERTRK--LKKEDTATRKNACPFRLRGYFLASQECNLSVVCGEHNHELS 140
                 789*******99887733.335667889*********9998..8889999999********99999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MAEPPFELKP NIDEPDIVQP NVVEPDIEQP NFSVNTTNYF FNCEKYKVRD EMIEWCKKEA  60
VKAGFTMVIE KSNSGSYRRK NYFVLGCSRG GAYKERTRKL KKEDTATRKN ACPFRLRGYF  120
LASQECNLSV VCGEHNHELS KNLEGHTLAG RLKPAENECV HELSRNLVAP KNILSTLKGQ  180
NPESKTSMKQ IYNARQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
178101RRKNYFVLGCSRGGAYKERTRKLK