PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI15391.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LBD

Protein Properties

Length: 95aa MW: 10608.8 Da PI: 6.9509

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI15391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	41.4	4.1e-13	1	40	61	100
DUF260 61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++e MCI15391.1 1 MVYEANARVRDPVYGCVGAISSLQQQVDVLRSQLAQAQAE 40 69*********************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence
MVYEANARVR DPVYGCVGAI SSLQQQVDVL RSQLAQAQAE VVHMKMHQFS SPNQHQPSYF 60 PTPTASNSSP PSENVYQSSR LVSSHINIDQ SLWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16530.1	3e-18	LBD family protein