PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI15438.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NAC

Protein Properties

Length: 106aa MW: 11890.5 Da PI: 10.0621

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI15438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.7	2.6e-28	17	93	52	128
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++w+fFs+ ++++a+g r+nr+t+ gyWkatg+ v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+ MCI15438.1 17 REDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGKKTKWKMNEYRA 93 45678**********************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 106 aa Download sequence
MILLQCVDAA LAGELCREDK EQWFFFSPGQ EREARGGRPN RTTACGYWKA TGSPGYVYSS 60 DNKVIGVKKT MVFYKGKAPS GKKTKWKMNE YRAIQVSNQS NTATPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.1	2e-47	NAC family protein