PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15662.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 166aa    MW: 18375.7 Da    PI: 7.5586
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.88.1e-16543747
                     HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     eEd  +v a++ +G++ W++Iar ++ gRt++ +k++w++ 
       MCI15662.1  5 EEDRTIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 43
                     9***************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MNCYEEDRTI VAAHAIHGNK WAAIARLLPG RTDNAIKNHW NSTLRRRGID QIRLESGIMV  60
EAKASSEETL SCGDVNSLKS SEGRDVSSME IVADKYEGNA RTDAQLYHEV RDPPTLFKPV  120
ARVSAFNVYN TFNGSQPSTS VPRPVPMQGP ILHPPKSDAE ICKMLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.14e-35MYB family protein