PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15882.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 143aa    MW: 16098.9 Da    PI: 11.0823
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.8e-094383954
                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  MCI15882.1 43 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 83
                699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MSAMREMIFR MAVMQPIHID PETIKPPKRK NVKISKDPQS VAARHRRERI SERIRILQRL  60
VPGGTKMDTA SMLDEAIHYV KFLKKQVQTL EQAGANKPLN FVGFPGVVST TNANFNYSSN  120
LLRGCSSSSP YQIVGPTSKK MLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-43bHLH family protein