PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI15972.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 98aa    MW: 11126.5 Da    PI: 10.4635
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI15972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1703.6e-223294163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L +eN +L+ el+++k e++k  se+
  MCI15972.1 32 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLRAELSRIKSEYEKALSEN 94
                89********************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MHGKVPSTAV AGGMVNAGPR DGVHSQLWLQ DERELKRQRR KQSNRESARR SRLRKQAECD  60
ELAQRAEVLN EENASLRAEL SRIKSEYEKA LSENAALK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14955RRSRLRK
24956RRSRLRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-44bZIP family protein