PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17022.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 173aa    MW: 19022.6 Da    PI: 7.5763
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS130.22.3e-409165218374
        GRAS 218 vsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWr 316
                    ++   ++L+  k l+Pk+v++ve+e+    + F+erf+++l++ysa+fdslea++p ++++r+ vEr+++g++i   +    +     +e+ ++W 
  MCI17022.1   9 YRAPDSVASFLNGAKALNPKLVTLVEEEVGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLGRIYRT--GGEEERKSWG 105
                 444555678**********************************************************************99988776..7778889*** PP

        GRAS 317 erleeaGFkpvplsekaakqaklllrkvksdgyrveee...sgslvlgWkdrpLvsvSaWr 374
                 e+l++aGF+ vp+s  + +qaklll  ++ dgyrvee    s+ lvl Wk+r+L+s+S W+
  MCI17022.1 106 EWLGAAGFRGVPVSFANHCQAKLLLGLFN-DGYRVEEVgvgSNKLVLDWKSRRLLSASLWT 165
                 *****************************.******88777*******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MLNLPHLSYR APDSVASFLN GAKALNPKLV TLVEEEVGSV VGGFVERFMD SLHHYSAVFD  60
SLEAGFPMQN RARALVERVF FGPRIAGSLG RIYRTGGEEE RKSWGEWLGA AGFRGVPVSF  120
ANHCQAKLLL GLFNDGYRVE EVGVGSNKLV LDWKSRRLLS ASLWTCSSSD SDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-52GRAS family protein