PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17125.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 132aa    MW: 15591.1 Da    PI: 5.0216
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.3e-101242448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Iar+++ gRt++++k++w+++l
       MCI17125.1  1 WSKIARRLP-GRTDNEIKNHWRTHL 24
                     *********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
WSKIARRLPG RTDNEIKNHW RTHLQKRVQV QQEGEFMYKV ESVAHDFNKK SIDVVSNSEG  60
ETKASSVDSF PLSEWGMGNS PYENRIFDWI VELQNGYSDK EKELGRDCKS THEYNPQQEY  120
DTWDYSGILW DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.12e-18MYB family protein