PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17161.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 181aa    MW: 20582 Da    PI: 9.7002
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.4e-322985158
   CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                +ep+YVN+KQy++Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg gGrF
  MCI17161.1 29 EEPIYVNSKQYHAILRRRQCRAKLEAHNKL-IKDRKPYLHESRHVHALKRARGAGGRF 85
                69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSSNSDQLLH GQLMETAPVR IPLPSDMTEE PIYVNSKQYH AILRRRQCRA KLEAHNKLIK  60
DRKPYLHESR HVHALKRARG AGGRFLNAKK LKESKQASPN HGQNVSTSYT CLNLNGNMSE  120
SKIHDQVENY RDGASASDVT YASNKNEMFQ QQQELEFRLC SYPSSQTGRN MQDYTADKSV  180
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-43NF-YA family protein