PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17193.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 225aa    MW: 24549.4 Da    PI: 9.7336
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.82.1e-1653145186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++ + +L++a  e+  +l+rg+l++++W+ev++++         r+ +r+ +qCk++++ l+k+yk +k++ ++   + +s +p+f++l+
  MCI17193.1  53 CWSEDATSTLVDAWGERYVDLNRGNLRQKHWQEVADAVndihaagNNRKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFSRLD 145
                 7********************************************99***************************9999999999******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MASFSGADQT QPSTDFSNAT SVFMDSITGG PSPVNFAPPR PPSSYPFPGR EDCWSEDATS  60
TLVDAWGERY VDLNRGNLRQ KHWQEVADAV NDIHAAGNNR KARRTDVQCK NRIDTLKKKY  120
KIEKARVSES DGGYQSPWPF FSRLDILIGD TFPVKKLSPP ATVRTTPAAV KPPLSPPAWI  180
ISHPVGPRSG TQKRPALMNR DDASFRRNFS AFAAAAAAAA EAESG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-53Trihelix family protein