PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17307.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 215aa    MW: 23553.5 Da    PI: 9.6044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-202069255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa+++++g
  MCI17307.1 20 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAARQFRG 69
                58*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
NLKIKKPFNN NNNVTTTEIH FRGVRKRPWG RYAAEIRDPG KKSRVWLGTF DTAEEAAKAY  60
DAAARQFRGP KAKTNFPPPS DVVKEDSPSQ SSTVESSTPE REITRPREVA AAVAAGGVMD  120
RFPFLSIQQQ IMPFSGVGAV NGMVTAVNPV FFFDPAARAE FMNQRFSTRF EPGPVEFNIG  180
FGGGVQSDSD SSSVVDCQPK RALNLDLNLA PPMDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-37ERF family protein